STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCS82481.1Iron export ABC transporter permease subunit FetB; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
OCS82482.1
Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
OCS82480.1
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
OCS82483.1
EBSC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
OCS82484.1
Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.468
OCS86590.1
Suppressor of lin-12 (Sel-1L); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.448
OCS82485.1
Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.404
Your Current Organism:
Caryophanon tenue
NCBI taxonomy Id: 33978
Other names: ATCC 33098, C. tenue, DSM 14152, NCDO 2324, NCIB 9535, NCIB:9535, NCIMB 9535, VKM B-106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.