Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Msp_0154 | Msp_0219 | Msp_0154 | Msp_0219 | Member of asn/thr-rich large protein family. | Conserved hypothetical protein. | 0.420 |
Msp_0154 | Msp_0466 | Msp_0154 | Msp_0466 | Member of asn/thr-rich large protein family. | Hypothetical protein. | 0.406 |
Msp_0218 | Msp_0219 | Msp_0218 | Msp_0219 | Predicted glycosyltransferase; Pfam00535. | Conserved hypothetical protein. | 0.501 |
Msp_0218 | Msp_0220 | Msp_0218 | Msp_0220 | Predicted glycosyltransferase; Pfam00535. | Predicted glycosyltransferase; COG0463, pfam00535. | 0.584 |
Msp_0219 | Msp_0154 | Msp_0219 | Msp_0154 | Conserved hypothetical protein. | Member of asn/thr-rich large protein family. | 0.420 |
Msp_0219 | Msp_0218 | Msp_0219 | Msp_0218 | Conserved hypothetical protein. | Predicted glycosyltransferase; Pfam00535. | 0.501 |
Msp_0219 | Msp_0220 | Msp_0219 | Msp_0220 | Conserved hypothetical protein. | Predicted glycosyltransferase; COG0463, pfam00535. | 0.796 |
Msp_0219 | Msp_0466 | Msp_0219 | Msp_0466 | Conserved hypothetical protein. | Hypothetical protein. | 0.450 |
Msp_0219 | Msp_0590 | Msp_0219 | Msp_0590 | Conserved hypothetical protein. | Member of asn/thr-rich large protein family. | 0.413 |
Msp_0219 | Msp_0702 | Msp_0219 | Msp_0702 | Conserved hypothetical protein. | Conserved hypothetical protein; COG04293. | 0.441 |
Msp_0219 | Msp_1108 | Msp_0219 | Msp_1108 | Conserved hypothetical protein. | Member of asn/thr-rich large protein family. | 0.595 |
Msp_0219 | Msp_1419 | Msp_0219 | Msp_1419 | Conserved hypothetical protein. | Hypothetical protein. | 0.423 |
Msp_0219 | truD | Msp_0219 | Msp_0221 | Conserved hypothetical protein. | TruD; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.508 |
Msp_0220 | Msp_0218 | Msp_0220 | Msp_0218 | Predicted glycosyltransferase; COG0463, pfam00535. | Predicted glycosyltransferase; Pfam00535. | 0.584 |
Msp_0220 | Msp_0219 | Msp_0220 | Msp_0219 | Predicted glycosyltransferase; COG0463, pfam00535. | Conserved hypothetical protein. | 0.796 |
Msp_0220 | truD | Msp_0220 | Msp_0221 | Predicted glycosyltransferase; COG0463, pfam00535. | TruD; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.448 |
Msp_0466 | Msp_0154 | Msp_0466 | Msp_0154 | Hypothetical protein. | Member of asn/thr-rich large protein family. | 0.406 |
Msp_0466 | Msp_0219 | Msp_0466 | Msp_0219 | Hypothetical protein. | Conserved hypothetical protein. | 0.450 |
Msp_0466 | Msp_1108 | Msp_0466 | Msp_1108 | Hypothetical protein. | Member of asn/thr-rich large protein family. | 0.449 |
Msp_0590 | Msp_0219 | Msp_0590 | Msp_0219 | Member of asn/thr-rich large protein family. | Conserved hypothetical protein. | 0.413 |
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