STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418255_00286Unannotated protein. (304 aa)    
Predicted Functional Partners:
GCA_001418255_00285
Unannotated protein.
 
 
  0.986
GCA_001418255_00287
Unannotated protein.
 
 
  0.979
potA
Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
  0.950
cpdA
Unannotated protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
       0.800
GCA_001418255_00343
Unannotated protein.
 
 
  0.693
GCA_001418255_01702
Unannotated protein.
 
 
  0.659
GCA_001418255_00352
Unannotated protein.
  
 
  0.627
GCA_001418255_00345
Unannotated protein.
  
  
  0.563
GCA_001418255_00344
Unannotated protein.
  
  
  0.551
GCA_001418255_00281
Unannotated protein.
       0.541
Your Current Organism:
Thiomonas bhubaneswarensis
NCBI taxonomy Id: 339866
Other names: DSM 18181, JCM 14806, T. bhubaneswarensis, Thiomonas bhubaneswarensis Panda et al. 2009, Thiomonas sp. S10, strain S10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.