Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001418255_00634 | GCA_001418255_00638 | GCA_001418255_00634 | GCA_001418255_00638 | Unannotated protein. | Unannotated protein. | 0.498 |
GCA_001418255_00634 | GCA_001418255_02117 | GCA_001418255_00634 | GCA_001418255_02117 | Unannotated protein. | Unannotated protein. | 0.712 |
GCA_001418255_00638 | GCA_001418255_00634 | GCA_001418255_00638 | GCA_001418255_00634 | Unannotated protein. | Unannotated protein. | 0.498 |
GCA_001418255_00638 | GCA_001418255_00639 | GCA_001418255_00638 | GCA_001418255_00639 | Unannotated protein. | Unannotated protein. | 0.491 |
GCA_001418255_00638 | GCA_001418255_02117 | GCA_001418255_00638 | GCA_001418255_02117 | Unannotated protein. | Unannotated protein. | 0.418 |
GCA_001418255_00638 | GCA_001418255_02286 | GCA_001418255_00638 | GCA_001418255_02286 | Unannotated protein. | Unannotated protein. | 0.583 |
GCA_001418255_00638 | GCA_001418255_03039 | GCA_001418255_00638 | GCA_001418255_03039 | Unannotated protein. | Unannotated protein. | 0.538 |
GCA_001418255_00638 | Ga0061069_1025 | GCA_001418255_00638 | GCA_001418255_00529 | Unannotated protein. | Unannotated protein. | 0.424 |
GCA_001418255_00638 | dsbD | GCA_001418255_00638 | GCA_001418255_00142 | Unannotated protein. | Unannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.594 |
GCA_001418255_00638 | polA | GCA_001418255_00638 | GCA_001418255_02137 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.435 |
GCA_001418255_00639 | GCA_001418255_00638 | GCA_001418255_00639 | GCA_001418255_00638 | Unannotated protein. | Unannotated protein. | 0.491 |
GCA_001418255_02117 | GCA_001418255_00634 | GCA_001418255_02117 | GCA_001418255_00634 | Unannotated protein. | Unannotated protein. | 0.712 |
GCA_001418255_02117 | GCA_001418255_00638 | GCA_001418255_02117 | GCA_001418255_00638 | Unannotated protein. | Unannotated protein. | 0.418 |
GCA_001418255_02286 | GCA_001418255_00638 | GCA_001418255_02286 | GCA_001418255_00638 | Unannotated protein. | Unannotated protein. | 0.583 |
GCA_001418255_03039 | GCA_001418255_00638 | GCA_001418255_03039 | GCA_001418255_00638 | Unannotated protein. | Unannotated protein. | 0.538 |
GCA_001418255_03039 | Ga0061069_1025 | GCA_001418255_03039 | GCA_001418255_00529 | Unannotated protein. | Unannotated protein. | 0.596 |
Ga0061069_1025 | GCA_001418255_00638 | GCA_001418255_00529 | GCA_001418255_00638 | Unannotated protein. | Unannotated protein. | 0.424 |
Ga0061069_1025 | GCA_001418255_03039 | GCA_001418255_00529 | GCA_001418255_03039 | Unannotated protein. | Unannotated protein. | 0.596 |
Ga0061069_1025 | dsbD | GCA_001418255_00529 | GCA_001418255_00142 | Unannotated protein. | Unannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.596 |
dsbD | GCA_001418255_00638 | GCA_001418255_00142 | GCA_001418255_00638 | Unannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Unannotated protein. | 0.594 |
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