Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001418255_00618 | Ga0061069_1128 | GCA_001418255_00618 | GCA_001418255_02794 | Unannotated protein. | Unannotated protein. | 0.745 |
GCA_001418255_02797 | Ga0061069_1127 | GCA_001418255_02797 | GCA_001418255_02793 | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Unannotated protein. | 0.742 |
GCA_001418255_02797 | Ga0061069_1128 | GCA_001418255_02797 | GCA_001418255_02794 | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Unannotated protein. | 0.725 |
GCA_001418255_02797 | gmk | GCA_001418255_02797 | GCA_001418255_02795 | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | 0.894 |
GCA_001418255_02797 | rpoZ | GCA_001418255_02797 | GCA_001418255_02796 | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.855 |
Ga0061069_1127 | GCA_001418255_02797 | GCA_001418255_02793 | GCA_001418255_02797 | Unannotated protein. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.742 |
Ga0061069_1127 | Ga0061069_1128 | GCA_001418255_02793 | GCA_001418255_02794 | Unannotated protein. | Unannotated protein. | 0.605 |
Ga0061069_1127 | gmk | GCA_001418255_02793 | GCA_001418255_02795 | Unannotated protein. | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | 0.653 |
Ga0061069_1127 | rpoZ | GCA_001418255_02793 | GCA_001418255_02796 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.632 |
Ga0061069_1128 | GCA_001418255_00618 | GCA_001418255_02794 | GCA_001418255_00618 | Unannotated protein. | Unannotated protein. | 0.745 |
Ga0061069_1128 | GCA_001418255_02797 | GCA_001418255_02794 | GCA_001418255_02797 | Unannotated protein. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.725 |
Ga0061069_1128 | Ga0061069_1127 | GCA_001418255_02794 | GCA_001418255_02793 | Unannotated protein. | Unannotated protein. | 0.605 |
Ga0061069_1128 | coaD | GCA_001418255_02794 | GCA_001418255_00670 | Unannotated protein. | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.598 |
Ga0061069_1128 | gmk | GCA_001418255_02794 | GCA_001418255_02795 | Unannotated protein. | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | 0.908 |
Ga0061069_1128 | rpoZ | GCA_001418255_02794 | GCA_001418255_02796 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.834 |
coaD | Ga0061069_1128 | GCA_001418255_00670 | GCA_001418255_02794 | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Unannotated protein. | 0.598 |
coaD | gmk | GCA_001418255_00670 | GCA_001418255_02795 | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | 0.482 |
gmk | GCA_001418255_02797 | GCA_001418255_02795 | GCA_001418255_02797 | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.894 |
gmk | Ga0061069_1127 | GCA_001418255_02795 | GCA_001418255_02793 | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | Unannotated protein. | 0.653 |
gmk | Ga0061069_1128 | GCA_001418255_02795 | GCA_001418255_02794 | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | Unannotated protein. | 0.908 |
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