Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARD86162.1 | ARD86163.1 | A3306_02795 | A3306_02800 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| ARD86162.1 | ARD86164.1 | A3306_02795 | A3306_02810 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| ARD86162.1 | ARD86875.1 | A3306_02795 | A3306_07135 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.406 |
| ARD86162.1 | ARD86902.1 | A3306_02795 | A3306_07315 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.405 |
| ARD86162.1 | ARD86955.1 | A3306_02795 | A3306_02805 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| ARD86162.1 | sucC | A3306_02795 | A3306_02790 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.642 |
| ARD86163.1 | ARD86162.1 | A3306_02800 | A3306_02795 | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| ARD86163.1 | ARD86164.1 | A3306_02800 | A3306_02810 | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| ARD86163.1 | ARD86955.1 | A3306_02800 | A3306_02805 | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| ARD86163.1 | sucC | A3306_02800 | A3306_02790 | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.642 |
| ARD86164.1 | ARD86162.1 | A3306_02810 | A3306_02795 | Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| ARD86164.1 | ARD86163.1 | A3306_02810 | A3306_02800 | Derived by automated computational analysis using gene prediction method: Protein Homology. | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| ARD86164.1 | ARD86955.1 | A3306_02810 | A3306_02805 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.925 |
| ARD86164.1 | sucC | A3306_02810 | A3306_02790 | Derived by automated computational analysis using gene prediction method: Protein Homology. | succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.441 |
| ARD86875.1 | ARD86162.1 | A3306_07135 | A3306_02795 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.406 |
| ARD86902.1 | ARD86162.1 | A3306_07315 | A3306_02795 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.405 |
| ARD86955.1 | ARD86162.1 | A3306_02805 | A3306_02795 | Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| ARD86955.1 | ARD86163.1 | A3306_02805 | A3306_02800 | Derived by automated computational analysis using gene prediction method: Protein Homology. | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| ARD86955.1 | ARD86164.1 | A3306_02805 | A3306_02810 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.925 |
| ARD86955.1 | sucC | A3306_02805 | A3306_02790 | Derived by automated computational analysis using gene prediction method: Protein Homology. | succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.472 |
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