STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3306_03785Alkaline phosphatase; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)    
Predicted Functional Partners:
ARD86385.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.854
ARD86939.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.611
ARD86223.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.611
ARD86723.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.611
ARD86301.1
Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.585
ARD86035.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.556
ARD86692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.504
pcrA
ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.488
ARD86247.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.480
ARD86325.1
LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
Your Current Organism:
Rickettsia bellii
NCBI taxonomy Id: 33990
Other names: R. bellii, RML 369-C, strain 369L42-1
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