STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD86564.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (771 aa)    
Predicted Functional Partners:
ARD86563.1
Pilus assembly protein PapD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.967
ARD86565.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
ARD86562.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.899
ARD86083.1
Type IV secretion system protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.603
ARD86651.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.571
ARD86469.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.548
rpmJ
50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.513
ARD86471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.510
ARD86473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.510
ARD86164.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
Your Current Organism:
Rickettsia bellii
NCBI taxonomy Id: 33990
Other names: R. bellii, RML 369-C, strain 369L42-1
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