STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkJ1Alcohol dehydrogenase. (547 aa)    
Predicted Functional Partners:
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
  0.800
PmtA
Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase.
     
  0.800
plcN2
Non-hemolytic phospholipase C precursor.
     
  0.800
KOEU_20460
WD domain, G-beta repeat.
    
 0.753
KOEU_04670
Tautomerase enzyme.
       0.727
fdhC2
Fructose dehydrogenase cytochrome subunit precursor.
 
 
 
 0.596
KOEU_03110
Ankyrin repeats (3 copies).
    
 0.535
ankX
Phosphocholine transferase AnkX.
    
 0.535
cynR1
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
       0.529
fdhS
Fructose dehydrogenase small subunit precursor.
   
   0.506
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.