Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ompWOuter membrane protein W precursor. (261 aa)    
Predicted Functional Partners:
hemN1
Oxygen-independent coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.980
KOEU_09060
Hypothetical protein.
       0.682
fixK1
Nitrogen fixation regulation protein FixK.
 
  
 0.612
KOEU_02130
Polyphosphate kinase 2 (PPK2).
   
    0.536
KOEU_28390
Polyphosphate kinase 2 (PPK2).
   
    0.536
KOEU_09030
Hypothetical protein.
       0.503
KOEU_14230
ferredoxin--NADP reductase.
  
     0.486
xpkA
Xylulose-5-phosphate phosphoketolase.
   
    0.476
bfrD
Putative TonB-dependent receptor BfrD precursor.
  
   
 0.474
aaeB6
P-hydroxybenzoic acid efflux pump subunit AaeB.
  
     0.473
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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