Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
etfBElectron transfer flavoprotein subunit beta. (272 aa)    
Predicted Functional Partners:
KOEU_09070
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
etfA
Electron transfer flavoprotein subunit alpha.
 0.999
ydbM2
Putative acyl-CoA dehydrogenase YdbM.
 
 
 0.886
soxC1
Dibenzothiophene desulfurization enzyme C.
 
 
 0.860
ydbM1
Putative acyl-CoA dehydrogenase YdbM.
 
 
 0.850
soxC2
Dibenzothiophene desulfurization enzyme C.
 
 
 0.824
echA8
Putative enoyl-CoA hydratase echA8.
 
 
 0.796
soxC3
Dibenzothiophene desulfurization enzyme C.
  
 
 0.792
KOEU_04510
Hypothetical protein; Acyl-CoA dehydrogenase, N-terminal domain.
  
 
 0.789
gltD1
Glutamate synthase [NADPH] small chain.
  
 
 0.731
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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