STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcaRHca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
oxyR3
Hydrogen peroxide-inducible activator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.774
gltC5
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
  
     0.772
yofA2
HTH-type transcriptional regulator YofA; Belongs to the LysR transcriptional regulatory family.
  
     0.756
dmlR3
HTH-type transcriptional regulator DmlR; Belongs to the LysR transcriptional regulatory family.
  
     0.755
cynR2
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
     0.753
tfdS
HTH-type transcriptional regulator TfdS; Belongs to the LysR transcriptional regulatory family.
  
     0.701
dmlR4
HTH-type transcriptional regulator DmlR; Belongs to the LysR transcriptional regulatory family.
  
     0.681
pgrR3
HTH-type transcriptional regulator PgrR; Belongs to the LysR transcriptional regulatory family.
  
     0.585
araC
L-arabonate dehydratase; Belongs to the IlvD/Edd family.
       0.532
gcvA3
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.491
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.