Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KOEU_12230 | KOEU_12250 | KOEU_12230 | KOEU_12250 | SCO1/SenC. | Zinc-finger domain protein. | 0.747 |
KOEU_12230 | acoC1 | KOEU_12230 | KOEU_12260 | SCO1/SenC. | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system. | 0.540 |
KOEU_12230 | oppA | KOEU_12230 | KOEU_12220 | SCO1/SenC. | Periplasmic oligopeptide-binding protein precursor. | 0.733 |
KOEU_12230 | polA | KOEU_12230 | KOEU_12240 | SCO1/SenC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.822 |
KOEU_12250 | KOEU_12230 | KOEU_12250 | KOEU_12230 | Zinc-finger domain protein. | SCO1/SenC. | 0.747 |
KOEU_12250 | acoC1 | KOEU_12250 | KOEU_12260 | Zinc-finger domain protein. | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system. | 0.645 |
KOEU_12250 | oppA | KOEU_12250 | KOEU_12220 | Zinc-finger domain protein. | Periplasmic oligopeptide-binding protein precursor. | 0.707 |
KOEU_12250 | polA | KOEU_12250 | KOEU_12240 | Zinc-finger domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.825 |
acoC1 | KOEU_12230 | KOEU_12260 | KOEU_12230 | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system. | SCO1/SenC. | 0.540 |
acoC1 | KOEU_12250 | KOEU_12260 | KOEU_12250 | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system. | Zinc-finger domain protein. | 0.645 |
acoC1 | oppA | KOEU_12260 | KOEU_12220 | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system. | Periplasmic oligopeptide-binding protein precursor. | 0.516 |
acoC1 | polA | KOEU_12260 | KOEU_12240 | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.706 |
dppB | oppA | KOEU_11210 | KOEU_12220 | Dipeptide transport system permease protein DppB. | Periplasmic oligopeptide-binding protein precursor. | 0.997 |
dppB | oppC | KOEU_11210 | KOEU_11200 | Dipeptide transport system permease protein DppB. | Oligopeptide transport system permease protein OppC. | 0.999 |
dppB | oppD | KOEU_11210 | KOEU_11220 | Dipeptide transport system permease protein DppB. | Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. | 0.999 |
dppB | oppF | KOEU_11210 | KOEU_11230 | Dipeptide transport system permease protein DppB. | Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. | 0.992 |
dppB | ybhF | KOEU_11210 | KOEU_28450 | Dipeptide transport system permease protein DppB. | Putative ABC transporter ATP-binding protein YbhF. | 0.880 |
dppB | yecS | KOEU_11210 | KOEU_09850 | Dipeptide transport system permease protein DppB. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.479 |
oppA | KOEU_12230 | KOEU_12220 | KOEU_12230 | Periplasmic oligopeptide-binding protein precursor. | SCO1/SenC. | 0.733 |
oppA | KOEU_12250 | KOEU_12220 | KOEU_12250 | Periplasmic oligopeptide-binding protein precursor. | Zinc-finger domain protein. | 0.707 |
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