STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOEU_15870PD-(D/E)XK nuclease superfamily protein. (1016 aa)    
Predicted Functional Partners:
addA
ATP-dependent helicase/nuclease subunit A; Belongs to the helicase family. UvrD subfamily.
   
 0.982
tsaE
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
 
     0.859
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
 
     0.850
lolA2
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.797
KOEU_20170
DNA polymerase III subunit delta.
 
   
 0.764
KOEU_27510
Hypothetical protein; Belongs to the UPF0335 family.
  
     0.753
lolA1
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.751
KOEU_22090
Stringent starvation protein B.
  
     0.747
HolC
DNA polymerase III subunit chi.
  
     0.731
dnaJ1
Chaperone protein DnaJ.
  
     0.721
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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