STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprM5Outer membrane protein OprM precursor. (571 aa)    
Predicted Functional Partners:
mexB
Multidrug resistance protein MexB.
 
 0.911
mexA
Multidrug resistance protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.791
mdtA2
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.669
emrA1
Multidrug export protein EmrA.
 
 
 0.655
ttgW
Putative HTH-type transcriptional regulator TtgW.
 
     0.598
emrK
Putative multidrug resistance protein EmrK.
 
 
 0.593
emrA2
Multidrug export protein EmrA.
 
 
 0.528
dksA
RNA polymerase-binding transcription factor DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
       0.511
mdtA1
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.426
hlyD
Hemolysin secretion protein D, plasmid.
  
 
 0.415
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.