STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tamBTranslocation and assembly module TamB. (1400 aa)    
Predicted Functional Partners:
tamA
Translocation and assembly module TamA precursor.
 
 
 0.996
KOEU_15650
Hypothetical protein.
  
     0.763
KOEU_13140
Outer membrane protein (OmpH-like).
 
   
 0.671
lptD1
LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.651
KOEU_00800
Mce related protein.
 
   
 0.631
KOEU_34850
Gram-negative bacterial tonB protein.
  
     0.604
KOEU_20180
Hypothetical protein.
  
     0.600
KOEU_22310
Outer membrane protein (OmpH-like).
 
   
 0.588
oprB10
Porin B precursor.
  
     0.578
KOEU_25580
Hypothetical protein.
  
     0.561
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.