STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hosATranscriptional regulator HosA. (145 aa)    
Predicted Functional Partners:
ompR3
Transcriptional regulatory protein OmpR.
  
  
 0.846
KOEU_16740
Hypothetical protein; COQ9.
 
     0.562
def3
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
  
    0.525
moaD
Molybdopterin synthase sulfur carrier subunit.
  
     0.508
dosP2
Oxygen sensor protein DosP.
 
  
 0.461
scpA1
Segregation and condensation protein A.
  
   0.440
phnP
Phosphoribosyl 1,2-cyclic phosphodiesterase.
  
     0.435
KOEU_25310
Hypothetical protein.
  
   
 0.429
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
 
    0.422
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.