STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOEU_17020Hypothetical protein. (153 aa)    
Predicted Functional Partners:
csd
Putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.991
sufC
Putative ATP-dependent transporter SufC.
  
 0.989
sufB
FeS cluster assembly protein SufB.
   
 0.985
sufD
FeS cluster assembly protein SufD.
   
 0.983
sufU
Zinc-dependent sulfurtransferase SufU.
 
    0.982
sufE
Cysteine desulfuration protein SufE.
     0.825
iscA
Iron-binding protein IscA; Belongs to the HesB/IscA family.
  
  
 0.769
cymR
HTH-type transcriptional regulator CymR.
       0.717
ophA1
Phthalate dioxygenase reductase.
  
  
 0.560
pobB
Phenoxybenzoate dioxygenase subunit beta.
  
  
 0.560
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.