Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KOEU_00380 | nodD2 | KOEU_00380 | KOEU_18180 | Putative transporter. | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | 0.414 |
emrK | emrY | KOEU_18200 | KOEU_18190 | Putative multidrug resistance protein EmrK. | Putative multidrug resistance protein EmrY. | 0.952 |
emrK | nodD2 | KOEU_18200 | KOEU_18180 | Putative multidrug resistance protein EmrK. | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | 0.480 |
emrK | oprM6 | KOEU_18200 | KOEU_18210 | Putative multidrug resistance protein EmrK. | Outer membrane protein OprM precursor. | 0.914 |
emrY | emrK | KOEU_18190 | KOEU_18200 | Putative multidrug resistance protein EmrY. | Putative multidrug resistance protein EmrK. | 0.952 |
emrY | nodD2 | KOEU_18190 | KOEU_18180 | Putative multidrug resistance protein EmrY. | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | 0.581 |
emrY | oprM6 | KOEU_18190 | KOEU_18210 | Putative multidrug resistance protein EmrY. | Outer membrane protein OprM precursor. | 0.865 |
nodD2 | KOEU_00380 | KOEU_18180 | KOEU_00380 | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | Putative transporter. | 0.414 |
nodD2 | emrK | KOEU_18180 | KOEU_18200 | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | Putative multidrug resistance protein EmrK. | 0.480 |
nodD2 | emrY | KOEU_18180 | KOEU_18190 | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | Putative multidrug resistance protein EmrY. | 0.581 |
nodD2 | oprM6 | KOEU_18180 | KOEU_18210 | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | Outer membrane protein OprM precursor. | 0.485 |
oprM6 | emrK | KOEU_18210 | KOEU_18200 | Outer membrane protein OprM precursor. | Putative multidrug resistance protein EmrK. | 0.914 |
oprM6 | emrY | KOEU_18210 | KOEU_18190 | Outer membrane protein OprM precursor. | Putative multidrug resistance protein EmrY. | 0.865 |
oprM6 | nodD2 | KOEU_18210 | KOEU_18180 | Outer membrane protein OprM precursor. | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | 0.485 |