Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KOEU_15900 | KOEU_21700 | KOEU_15900 | KOEU_21700 | ferredoxin--NADP reductase. | Alkyl hydroperoxide reductase subunit C. | 0.731 |
KOEU_15900 | cycY | KOEU_15900 | KOEU_02360 | ferredoxin--NADP reductase. | Thiol:disulfide interchange protein CycY precursor. | 0.413 |
KOEU_15900 | katE | KOEU_15900 | KOEU_28230 | ferredoxin--NADP reductase. | Catalase C; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.706 |
KOEU_15900 | mauD2 | KOEU_15900 | KOEU_18790 | ferredoxin--NADP reductase. | Methylamine utilization protein MauD. | 0.413 |
KOEU_15900 | trxB | KOEU_15900 | KOEU_27340 | ferredoxin--NADP reductase. | Thioredoxin reductase. | 0.913 |
KOEU_21700 | KOEU_15900 | KOEU_21700 | KOEU_15900 | Alkyl hydroperoxide reductase subunit C. | ferredoxin--NADP reductase. | 0.731 |
KOEU_21700 | ahpD | KOEU_21700 | KOEU_21710 | Alkyl hydroperoxide reductase subunit C. | Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.919 |
KOEU_21700 | ahpF | KOEU_21700 | KOEU_11390 | Alkyl hydroperoxide reductase subunit C. | NADH dehydrogenase. | 0.850 |
KOEU_21700 | bcp2 | KOEU_21700 | KOEU_16390 | Alkyl hydroperoxide reductase subunit C. | Putative peroxiredoxin. | 0.720 |
KOEU_21700 | cycY | KOEU_21700 | KOEU_02360 | Alkyl hydroperoxide reductase subunit C. | Thiol:disulfide interchange protein CycY precursor. | 0.623 |
KOEU_21700 | katE | KOEU_21700 | KOEU_28230 | Alkyl hydroperoxide reductase subunit C. | Catalase C; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.925 |
KOEU_21700 | mauD1 | KOEU_21700 | KOEU_18760 | Alkyl hydroperoxide reductase subunit C. | Methylamine utilization protein MauD. | 0.616 |
KOEU_21700 | mauD2 | KOEU_21700 | KOEU_18790 | Alkyl hydroperoxide reductase subunit C. | Methylamine utilization protein MauD. | 0.623 |
KOEU_21700 | oxyR2 | KOEU_21700 | KOEU_21690 | Alkyl hydroperoxide reductase subunit C. | Hydrogen peroxide-inducible activator protein; Belongs to the LysR transcriptional regulatory family. | 0.572 |
KOEU_21700 | trxB | KOEU_21700 | KOEU_27340 | Alkyl hydroperoxide reductase subunit C. | Thioredoxin reductase. | 0.739 |
ahpD | KOEU_21700 | KOEU_21710 | KOEU_21700 | Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Alkyl hydroperoxide reductase subunit C. | 0.919 |
ahpD | oxyR2 | KOEU_21710 | KOEU_21690 | Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Hydrogen peroxide-inducible activator protein; Belongs to the LysR transcriptional regulatory family. | 0.550 |
ahpF | KOEU_21700 | KOEU_11390 | KOEU_21700 | NADH dehydrogenase. | Alkyl hydroperoxide reductase subunit C. | 0.850 |
ahpF | katE | KOEU_11390 | KOEU_28230 | NADH dehydrogenase. | Catalase C; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.563 |
bcp2 | KOEU_21700 | KOEU_16390 | KOEU_21700 | Putative peroxiredoxin. | Alkyl hydroperoxide reductase subunit C. | 0.720 |
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