STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprB8Porin B precursor. (545 aa)    
Predicted Functional Partners:
oprB3
Porin B precursor.
  
  
  0.801
KOEU_33590
Carbohydrate-selective porin, OprB family.
  
  
  0.782
oprB6
Porin B precursor.
  
  
  0.722
oprB1
Porin B precursor.
  
  
 
0.676
oprB4
Porin B precursor.
  
  
 
0.663
bcsB
Cyclic di-GMP-binding protein precursor; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
   
 0.655
oprB5
Porin B precursor.
  
  
  0.645
bcsA
Cellulose synthase catalytic subunit.
  
   
 0.629
oprB9
Porin B precursor.
  
  
 
0.623
oprB10
Porin B precursor.
  
  
 
0.612
Your Current Organism:
Komagataeibacter europaeus
NCBI taxonomy Id: 33995
Other names: ATCC 51845, Acetobacter europaeus, DSM 6160, Gluconacetobacter europaeus, K. europaeus, LMG 18890, LMG:18890, strain DES 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.