STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN10932.13-hydroxybutyryl-CoA dehydratase. (147 aa)    
Predicted Functional Partners:
SEN88071.1
Polyhydroxyalkanoate synthase.
 
  
 0.954
SEN35465.1
Phosphotransacetylase.
 
  
 0.950
SEO13837.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.942
SEN77153.1
crotonyl-CoA carboxylase/reductase.
  
 0.932
SEO01442.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
  0.930
SEN80816.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.923
SEN82368.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.923
SEN19952.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.855
SEN12117.1
Acyl transferase domain-containing protein.
   
 0.846
SEN45743.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.815
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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