STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN37600.1Sarcosine oxidase subunit delta. (93 aa)    
Predicted Functional Partners:
SEN37612.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
 
 0.999
SEN37630.1
Sarcosine oxidase subunit gamma.
 
 0.997
SEN72345.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.996
SEN73124.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.996
SEN37578.1
N-methylglutamate dehydrogenase subunit A precursor.
 
  0.988
SEN73046.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.986
SEN72322.1
Sarcosine oxidase subunit gamma.
 
 0.955
SEN73112.1
Sarcosine oxidase subunit gamma.
 
 0.918
SEN72427.1
Sarcosine oxidase subunit beta.
 
  0.917
SEN73166.1
Sarcosine oxidase subunit beta.
 
  0.914
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.