STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN53959.1Alcohol dehydrogenase GroES-like domain-containing protein. (327 aa)    
Predicted Functional Partners:
SEN12117.1
Acyl transferase domain-containing protein.
 
 0.932
SEN53903.1
succinyl-CoA synthetase beta subunit.
  
    0.654
sucD-2
succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
       0.651
SEN35465.1
Phosphotransacetylase.
  
 0.642
SEN85607.1
Enterobactin synthetase component F.
 
 
 0.595
SEN19952.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.593
SEO13837.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.593
SEO28622.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
   
 
 0.590
SEN99825.1
[Acyl-carrier-protein] S-malonyltransferase.
 
   
 0.540
SEO19926.1
2,5-diketo-D-gluconate reductase B.
 
 
 0.463
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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