Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN58683.1 | SEN58731.1 | SAMN04489859_101058 | SAMN04489859_101060 | Uncharacterized membrane protein. | Glutathione S-transferase. | 0.503 |
SEN58683.1 | mtgA | SAMN04489859_101058 | SAMN04489859_101059 | Uncharacterized membrane protein. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.565 |
SEN58731.1 | SEN58683.1 | SAMN04489859_101060 | SAMN04489859_101058 | Glutathione S-transferase. | Uncharacterized membrane protein. | 0.503 |
SEN58731.1 | mtgA | SAMN04489859_101060 | SAMN04489859_101059 | Glutathione S-transferase. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.822 |
mtgA | SEN58683.1 | SAMN04489859_101059 | SAMN04489859_101058 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Uncharacterized membrane protein. | 0.565 |
mtgA | SEN58731.1 | SAMN04489859_101059 | SAMN04489859_101060 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Glutathione S-transferase. | 0.822 |