STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN96853.1Transposase, IS5 family. (178 aa)    
Predicted Functional Partners:
SEN96867.1
Transposase, IS5 family.
     0.950
SEO22488.1
Transposase domain.
 
     0.944
SEN10139.1
Transposase domain.
 
     0.934
SEN17114.1
Transposase domain.
 
     0.926
SEO28877.1
Transposase, IS5 family.
 
     0.822
SEN86263.1
Transposase, IS5 family.
 
     0.789
SEO22719.1
Transposase, IS5 family.
 
     0.789
SEN59836.1
Transposase, IS5 family.
 
     0.786
SEO29810.1
Transposase, IS5 family.
 
     0.786
SEO37910.1
Transposase, IS5 family.
 
     0.786
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.