STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN97855.1Cobaltochelatase CobS subunit. (323 aa)    
Predicted Functional Partners:
SEN97834.1
Cobaltochelatase CobT subunit.
 
 
 0.996
cobB
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
  0.946
SEN65546.1
Cobaltochelatase CobN subunit.
     
 0.934
SEO05139.1
DnaJ domain-containing protein.
 
     0.752
SEN35765.1
Nitric oxide reductase NorD protein.
  
  
 0.702
atpF
F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.661
SEN35703.1
Nitric oxide reductase, NorC subunit apoprotein.
  
    0.657
SEN97850.1
Protein of unknown function.
       0.655
SEN97881.1
Hypothetical protein.
       0.629
SEN35728.1
Nitric oxide reductase, NorB subunit apoprotein.
  
  
 0.628
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.