STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO02663.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. (401 aa)    
Predicted Functional Partners:
SEN37307.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
  
 0.986
SEN37336.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.967
SEN23479.1
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.864
SEN95945.1
Nitric oxide dioxygenase; Belongs to the globin family.
  
 
 0.842
SEO35175.1
Thioredoxin reductase.
  
 
 0.805
SEO18483.1
Ferredoxin, 2Fe-2S.
 
 
 0.777
SEN11870.1
Formate dehydrogenase alpha subunit.
 
 
 0.758
SEN15282.1
Ferredoxin, 2Fe-2S.
 
 
 0.754
SEN23456.1
Respiratory nitrate reductase beta subunit.
  
 
 0.752
SEN61473.1
Nitronate monooxygenase.
  
  
  0.741
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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