Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO03665.1 | SEO03685.1 | SAMN04489859_103017 | SAMN04489859_103018 | Hypothetical protein. | 2-oxoglutarate dehydrogenase E1 component. | 0.580 |
SEO03665.1 | SEO03705.1 | SAMN04489859_103017 | SAMN04489859_103019 | Hypothetical protein. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.580 |
SEO03665.1 | SEO03725.1 | SAMN04489859_103017 | SAMN04489859_103020 | Hypothetical protein. | Hypothetical protein. | 0.456 |
SEO03665.1 | SEO03746.1 | SAMN04489859_103017 | SAMN04489859_103021 | Hypothetical protein. | Uncharacterized conserved protein, MAPEG superfamily. | 0.456 |
SEO03685.1 | SEO03665.1 | SAMN04489859_103018 | SAMN04489859_103017 | 2-oxoglutarate dehydrogenase E1 component. | Hypothetical protein. | 0.580 |
SEO03685.1 | SEO03705.1 | SAMN04489859_103018 | SAMN04489859_103019 | 2-oxoglutarate dehydrogenase E1 component. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.999 |
SEO03685.1 | SEO03725.1 | SAMN04489859_103018 | SAMN04489859_103020 | 2-oxoglutarate dehydrogenase E1 component. | Hypothetical protein. | 0.626 |
SEO03685.1 | SEO03746.1 | SAMN04489859_103018 | SAMN04489859_103021 | 2-oxoglutarate dehydrogenase E1 component. | Uncharacterized conserved protein, MAPEG superfamily. | 0.776 |
SEO03685.1 | SEO03766.1 | SAMN04489859_103018 | SAMN04489859_103022 | 2-oxoglutarate dehydrogenase E1 component. | Dihydrolipoamide dehydrogenase. | 0.994 |
SEO03705.1 | SEO03665.1 | SAMN04489859_103019 | SAMN04489859_103017 | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Hypothetical protein. | 0.580 |
SEO03705.1 | SEO03685.1 | SAMN04489859_103019 | SAMN04489859_103018 | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 2-oxoglutarate dehydrogenase E1 component. | 0.999 |
SEO03705.1 | SEO03725.1 | SAMN04489859_103019 | SAMN04489859_103020 | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Hypothetical protein. | 0.597 |
SEO03705.1 | SEO03746.1 | SAMN04489859_103019 | SAMN04489859_103021 | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Uncharacterized conserved protein, MAPEG superfamily. | 0.676 |
SEO03705.1 | SEO03766.1 | SAMN04489859_103019 | SAMN04489859_103022 | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Dihydrolipoamide dehydrogenase. | 0.998 |
SEO03725.1 | SEO03665.1 | SAMN04489859_103020 | SAMN04489859_103017 | Hypothetical protein. | Hypothetical protein. | 0.456 |
SEO03725.1 | SEO03685.1 | SAMN04489859_103020 | SAMN04489859_103018 | Hypothetical protein. | 2-oxoglutarate dehydrogenase E1 component. | 0.626 |
SEO03725.1 | SEO03705.1 | SAMN04489859_103020 | SAMN04489859_103019 | Hypothetical protein. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.597 |
SEO03725.1 | SEO03746.1 | SAMN04489859_103020 | SAMN04489859_103021 | Hypothetical protein. | Uncharacterized conserved protein, MAPEG superfamily. | 0.812 |
SEO03725.1 | SEO03766.1 | SAMN04489859_103020 | SAMN04489859_103022 | Hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.566 |
SEO03746.1 | SEO03665.1 | SAMN04489859_103021 | SAMN04489859_103017 | Uncharacterized conserved protein, MAPEG superfamily. | Hypothetical protein. | 0.456 |
page 1 of 2