Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN78111.1 | vapC | SAMN04489859_101673 | SAMN04489859_10497 | Hypothetical protein. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.758 |
SEN88413.1 | vapC | SAMN04489859_102083 | SAMN04489859_10497 | Hypothetical protein. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.758 |
SEO15542.1 | vapC | SAMN04489859_103920 | SAMN04489859_10497 | Predicted transcriptional regulator. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.799 |
SEO23020.1 | vapC | SAMN04489859_10495 | SAMN04489859_10497 | HD domain-containing protein. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.436 |
SEO23032.1 | vapC | SAMN04489859_10496 | SAMN04489859_10497 | Hypothetical protein. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.791 |
SEO44758.1 | vapC | SAMN04489859_11182 | SAMN04489859_10497 | Hypothetical protein. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.758 |
vapC | SEN78111.1 | SAMN04489859_10497 | SAMN04489859_101673 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.758 |
vapC | SEN88413.1 | SAMN04489859_10497 | SAMN04489859_102083 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.758 |
vapC | SEO15542.1 | SAMN04489859_10497 | SAMN04489859_103920 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Predicted transcriptional regulator. | 0.799 |
vapC | SEO23020.1 | SAMN04489859_10497 | SAMN04489859_10495 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | HD domain-containing protein. | 0.436 |
vapC | SEO23032.1 | SAMN04489859_10497 | SAMN04489859_10496 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.791 |
vapC | SEO44758.1 | SAMN04489859_10497 | SAMN04489859_11182 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.758 |