STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO25363.1Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase. (339 aa)    
Predicted Functional Partners:
SEO25344.1
Sugar phosphate isomerase/epimerase.
 
 
  0.961
SEN36636.1
2-keto-myo-inositol dehydratase.
 
 
  0.955
SEN36656.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.894
SEN36509.1
5-deoxyglucuronate isomerase.
 
  
 0.893
SEN36554.1
5-dehydro-2-deoxygluconokinase.
 
 
 0.812
SEO25378.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
    0.688
SEO25396.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
    0.688
SEN45810.1
Myo-inositol-1(or 4)-monophosphatase.
    
  0.686
SEN79599.1
Myo-inositol-1(or 4)-monophosphatase.
    
  0.686
SEO25416.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
    0.653
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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