STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO33586.1Phosphatidylglycerophosphate synthase. (216 aa)    
Predicted Functional Partners:
SEO33605.1
Phosphatidate cytidylyltransferase.
 
 
 0.991
SEO33618.1
Acyltransferase.
 
 0.972
SEN69021.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
    0.769
SEO33640.1
Fumarylpyruvate hydrolase.
       0.717
SEN94818.1
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
    
 0.591
SEN49739.1
Glycerophosphoryl diester phosphodiesterase.
   
 0.583
SEN69614.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.579
SEO04735.1
CDP-diacylglycerol-choline O-phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.579
SEN70299.1
Exopolysaccharide biosynthesis protein YbjH.
  
 
 0.555
SEO29311.1
Sulfotransferase family protein.
  
     0.517
Your Current Organism:
Paracoccus alcaliphilus
NCBI taxonomy Id: 34002
Other names: ATCC 51199, CIP 106073, DSM 8512, IFO 16719, JCM 7364, NBRC 16719, P. alcaliphilus, strain Urakami 0-100
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