STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH83040.1Putative iron-regulated membrane protein. (436 aa)    
Predicted Functional Partners:
pcoC
Copper resistance protein C precursor.
  
    0.651
CUH83039.1
Hypothetical protein.
       0.623
CUH86019.1
Abi-like protein.
  
  
  0.537
sir
Sulfite reductase [ferredoxin].
     
 0.491
CUH83038.1
Pyridoxamine 5'-phosphate oxidase, FMN-binding family.
       0.473
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.443
sseA
3-mercaptopyruvate sulfurtransferase.
     
 0.425
ftsE
Cell division ATP-binding protein FtsE.
       0.404
CUH83036.1
FtsX-like permease family protein.
       0.404
CUH83037.1
2-acyl-glycerophospho-ethanolamine acyltransferase.
       0.404
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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