Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUH82957.1 | CUH82982.1 | TM5383_00139 | TM5383_00164 | methylmalonyl-CoA epimerase. | Putative GTPase/MT1543. | 0.784 |
| CUH82957.1 | CUH83427.1 | TM5383_00139 | TM5383_00615 | methylmalonyl-CoA epimerase. | Indolepyruvate ferredoxin oxidoreductase. | 0.576 |
| CUH82957.1 | ccrA2 | TM5383_00139 | TM5383_00255 | methylmalonyl-CoA epimerase. | Crotonyl-CoA reductase. | 0.904 |
| CUH82957.1 | scpA_1 | TM5383_00139 | TM5383_00253 | methylmalonyl-CoA epimerase. | Methylmalonyl-CoA mutase. | 0.980 |
| CUH82957.1 | scpA_3 | TM5383_00139 | TM5383_03120 | methylmalonyl-CoA epimerase. | Methylmalonyl-CoA mutase. | 0.993 |
| CUH82957.1 | sucC | TM5383_00139 | TM5383_00234 | methylmalonyl-CoA epimerase. | Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.464 |
| CUH82957.1 | sucD | TM5383_00139 | TM5383_00232 | methylmalonyl-CoA epimerase. | Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.426 |
| CUH82982.1 | CUH82957.1 | TM5383_00164 | TM5383_00139 | Putative GTPase/MT1543. | methylmalonyl-CoA epimerase. | 0.784 |
| CUH82982.1 | scpA_1 | TM5383_00164 | TM5383_00253 | Putative GTPase/MT1543. | Methylmalonyl-CoA mutase. | 0.991 |
| CUH82982.1 | scpA_3 | TM5383_00164 | TM5383_03120 | Putative GTPase/MT1543. | Methylmalonyl-CoA mutase. | 0.997 |
| CUH83058.1 | ccrA2 | TM5383_00240 | TM5383_00255 | Hypothetical protein. | Crotonyl-CoA reductase. | 0.908 |
| CUH83058.1 | mmgC_1 | TM5383_00240 | TM5383_00090 | Hypothetical protein. | Acyl-CoA dehydrogenase. | 0.937 |
| CUH83058.1 | scpA_1 | TM5383_00240 | TM5383_00253 | Hypothetical protein. | Methylmalonyl-CoA mutase. | 0.865 |
| CUH83058.1 | sucC | TM5383_00240 | TM5383_00234 | Hypothetical protein. | Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.814 |
| CUH83058.1 | sucD | TM5383_00240 | TM5383_00232 | Hypothetical protein. | Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.805 |
| CUH83427.1 | CUH82957.1 | TM5383_00615 | TM5383_00139 | Indolepyruvate ferredoxin oxidoreductase. | methylmalonyl-CoA epimerase. | 0.576 |
| CUH83427.1 | cfiB | TM5383_00615 | TM5383_02957 | Indolepyruvate ferredoxin oxidoreductase. | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.880 |
| CUH83427.1 | scpA_1 | TM5383_00615 | TM5383_00253 | Indolepyruvate ferredoxin oxidoreductase. | Methylmalonyl-CoA mutase. | 0.917 |
| CUH83427.1 | scpA_3 | TM5383_00615 | TM5383_03120 | Indolepyruvate ferredoxin oxidoreductase. | Methylmalonyl-CoA mutase. | 0.917 |
| CUH83427.1 | sucC | TM5383_00615 | TM5383_00234 | Indolepyruvate ferredoxin oxidoreductase. | Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.895 |
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