STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycGSensor histidine kinase YycG. (784 aa)    
Predicted Functional Partners:
glnG
Nitrogen regulation protein NR(I).
 0.986
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
0.954
zraS_1
Sensor protein ZraS.
 
0.943
rcsC_2
Sensor kinase protein RcsC.
   
 0.941
barA_3
Signal transduction histidine-protein kinase BarA.
   
 0.941
rcsC_3
Sensor kinase protein RcsC.
   
 0.941
CUH83602.1
Blue-light-activated protein.
 
 
0.922
arcB_1
Aerobic respiration control sensor protein ArcB.
   
0.903
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.903
luxQ_4
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
0.903
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.