Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH83300.1 | arcB_1 | TM5383_00485 | TM5383_00484 | Oxidoreductase molybdopterin binding domain protein. | Aerobic respiration control sensor protein ArcB. | 0.901 |
CUH83300.1 | degU_1 | TM5383_00485 | TM5383_00486 | Oxidoreductase molybdopterin binding domain protein. | Protease production enhancer protein. | 0.765 |
CUH83300.1 | degU_2 | TM5383_00485 | TM5383_00584 | Oxidoreductase molybdopterin binding domain protein. | Protease production enhancer protein. | 0.518 |
CUH83300.1 | liaR | TM5383_00485 | TM5383_00993 | Oxidoreductase molybdopterin binding domain protein. | Transcriptional regulatory protein LiaR. | 0.614 |
CUH83300.1 | luxQ_1 | TM5383_00485 | TM5383_00583 | Oxidoreductase molybdopterin binding domain protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.422 |
CUH83300.1 | luxQ_3 | TM5383_00485 | TM5383_00903 | Oxidoreductase molybdopterin binding domain protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.595 |
CUH83300.1 | luxQ_4 | TM5383_00485 | TM5383_00991 | Oxidoreductase molybdopterin binding domain protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.678 |
CUH83300.1 | yurK | TM5383_00485 | TM5383_00483 | Oxidoreductase molybdopterin binding domain protein. | Putative HTH-type transcriptional regulator YurK. | 0.572 |
arcB_1 | CUH83300.1 | TM5383_00484 | TM5383_00485 | Aerobic respiration control sensor protein ArcB. | Oxidoreductase molybdopterin binding domain protein. | 0.901 |
arcB_1 | degU_1 | TM5383_00484 | TM5383_00486 | Aerobic respiration control sensor protein ArcB. | Protease production enhancer protein. | 0.944 |
arcB_1 | degU_2 | TM5383_00484 | TM5383_00584 | Aerobic respiration control sensor protein ArcB. | Protease production enhancer protein. | 0.871 |
arcB_1 | liaR | TM5383_00484 | TM5383_00993 | Aerobic respiration control sensor protein ArcB. | Transcriptional regulatory protein LiaR. | 0.900 |
arcB_1 | luxQ_1 | TM5383_00484 | TM5383_00583 | Aerobic respiration control sensor protein ArcB. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.998 |
arcB_1 | luxQ_3 | TM5383_00484 | TM5383_00903 | Aerobic respiration control sensor protein ArcB. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.773 |
arcB_1 | luxQ_4 | TM5383_00484 | TM5383_00991 | Aerobic respiration control sensor protein ArcB. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.998 |
arcB_1 | yurK | TM5383_00484 | TM5383_00483 | Aerobic respiration control sensor protein ArcB. | Putative HTH-type transcriptional regulator YurK. | 0.592 |
degU_1 | CUH83300.1 | TM5383_00486 | TM5383_00485 | Protease production enhancer protein. | Oxidoreductase molybdopterin binding domain protein. | 0.765 |
degU_1 | arcB_1 | TM5383_00486 | TM5383_00484 | Protease production enhancer protein. | Aerobic respiration control sensor protein ArcB. | 0.944 |
degU_1 | luxQ_1 | TM5383_00486 | TM5383_00583 | Protease production enhancer protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.859 |
degU_1 | luxQ_3 | TM5383_00486 | TM5383_00903 | Protease production enhancer protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.606 |
page 1 of 3