STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH83337.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
nudF
ADP-ribose pyrophosphatase.
       0.785
alaS_1
Alanine--tRNA ligase.
 
     0.739
cbs
Putative cystathionine beta-synthase.
       0.697
CUH84028.1
Hypothetical protein.
  
     0.670
CUH85118.1
Hypothetical protein.
  
     0.639
CUH85883.1
Hypothetical protein.
  
     0.627
CUH83246.1
Putative acetyltransferase.
  
     0.621
CUH83219.1
Hypothetical protein.
  
     0.618
CUH84165.1
Cell division protein FtsN.
  
     0.611
CUH84027.1
Hypothetical protein.
  
     0.610
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.