STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsMPutative acetyltransferase EpsM. (220 aa)    
Predicted Functional Partners:
cynT
Carbonic anhydrase 1.
    
 0.960
CUH83462.1
Putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.835
kce_1
3-keto-5-aminohexanoate cleavage enzyme.
       0.782
CUH83464.1
Hypothetical protein.
       0.773
cat
Chloramphenicol acetyltransferase.
 
     0.646
CUH83466.1
Hypothetical protein.
       0.581
trxC
Thioredoxin-2.
    
   0.436
CUH85104.1
Thioredoxin C-1.
    
   0.436
trxA
Thioredoxin; Belongs to the thioredoxin family.
    
   0.436
rifK
3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
  0.417
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.