STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucUL-fucose mutarotase; Belongs to the RbsD / FucU family. (146 aa)    
Predicted Functional Partners:
CUH83748.1
Putative metal-dependent hydrolase of the TIM-barrel fold protein.
     0.949
pld1
Pyridoxal 4-dehydrogenase.
 
     0.893
CUH83751.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
 
     0.785
CUH83749.1
Fumarylacetoacetate (FAA) hydrolase family protein.
       0.773
aldH
NADP-dependent fatty aldehyde dehydrogenase.
       0.746
rbsB
D-ribose-binding periplasmic protein precursor.
 
   
 0.727
CUH83752.1
Ureidoglycolate lyase.
       0.701
rbsC_2
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
     0.649
rbsA_2
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
     0.611
CUH84992.1
GDSL-like Lipase/Acylhydrolase.
 
     0.458
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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