STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blh_1Beta-lactamase hydrolase-like protein. (287 aa)    
Predicted Functional Partners:
CUH83764.1
Putative transporter component.
 
     0.845
CUH83765.1
Putative transporter component.
 
     0.826
blh_2
Beta-lactamase hydrolase-like protein.
 
     0.800
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor.
 
  0.793
CUH85401.1
Molybdopterin biosynthesis protein MoeB.
  
 0.667
CUH85224.1
Putative sulfate transporterc/MT1781.
     0.615
gcvT_1
Aminomethyltransferase; Belongs to the GcvT family.
  
  0.559
gcvT_4
Aminomethyltransferase; Belongs to the GcvT family.
  
  0.559
stcD
Putative N-methylproline demethylase.
  
  0.556
gloA
Lactoylglutathione lyase.
  
  
  0.532
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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