STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
luxAAlkanal monooxygenase alpha chain. (345 aa)    
Predicted Functional Partners:
ntaB
FMN reductase (NADH) NtaB.
 
 
 0.964
CUH83834.1
Hypothetical protein.
 
     0.962
CUH83833.1
Tropinesterase.
 
    0.948
betB_1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.892
dhbF
Dimodular nonribosomal peptide synthase.
 
 
0.787
ydfH
Putative HTH-type transcriptional regulator YdfH.
 
     0.780
ppsE
Beta-ketoacyl-acyl-carrier-protein synthase I.
 
  
 0.740
CUH83836.1
Hypothetical protein.
 
     0.672
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
    
  0.670
CUH83837.1
4-carboxymuconolactone decarboxylase.
 
     0.658
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.