STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgC_3Acyl-CoA dehydrogenase. (386 aa)    
Predicted Functional Partners:
CUH84161.1
Hypothetical protein.
 
    0.939
fadJ_1
Fatty acid oxidation complex subunit alpha.
  
 0.933
etfA
Electron transfer flavoprotein large subunit.
 0.929
frc_1
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
 
  0.891
pcaF
Beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.889
fadB_2
Fatty acid oxidation complex subunit alpha.
  
 0.855
fadJ_2
Fatty acid oxidation complex subunit alpha.
  
 0.855
fadB_3
Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.855
citE
Citrate lyase subunit beta-like protein; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.852
etfB
Electron transfer flavoprotein small subunit.
 
 
 0.774
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.