STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH84304.1Hypothetical protein. (342 aa)    
Predicted Functional Partners:
oprF_2
Outer membrane porin F precursor.
 
     0.835
CUH85570.1
Hypothetical protein.
  
     0.760
CUH84477.1
Hypothetical protein.
  
     0.759
CUH85599.1
Hypothetical protein.
  
     0.720
CUH84408.1
Hypothetical protein.
  
     0.713
CUH84490.1
Hypothetical protein.
  
     0.683
CUH84303.1
Preprotein translocase subunit SecA.
       0.675
CUH84972.1
Hypothetical protein.
  
     0.639
CUH84028.1
Hypothetical protein.
  
     0.627
CUH84317.1
Core-2/I-Branching enzyme.
  
     0.627
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.