STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH84372.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
dhbF
Dimodular nonribosomal peptide synthase.
       0.722
ppsE
Beta-ketoacyl-acyl-carrier-protein synthase I.
  
  
 0.717
CUH84373.1
Phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex; Belongs to the P-Pant transferase superfamily.
       0.716
wbbL
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
       0.711
CUH84191.1
Hypothetical protein.
  
 0.625
ftsK
DNA translocase FtsK.
    
   0.606
CUH82953.1
Thioredoxin-related protein.
    
   0.583
CUH84378.1
PGL/p-HBAD biosynthesis glycosyltransferase/MT3031.
       0.547
CUH84694.1
Pectate lyase superfamily protein.
  
  0.528
CUH84466.1
Putative CtpA-like serine protease; Belongs to the peptidase S41A family.
   
   0.514
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.