Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUH84466.1 | CUH84467.1 | TM5383_01676 | TM5383_01677 | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | Membrane-bound metallopeptidase. | 0.915 |
| CUH84466.1 | luxQ_2 | TM5383_01676 | TM5383_00790 | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.452 |
| CUH84466.1 | rnr | TM5383_01676 | TM5383_01656 | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.406 |
| CUH84466.1 | rppH | TM5383_01676 | TM5383_01675 | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.904 |
| CUH84467.1 | CUH84466.1 | TM5383_01677 | TM5383_01676 | Membrane-bound metallopeptidase. | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | 0.915 |
| CUH84467.1 | luxQ_2 | TM5383_01677 | TM5383_00790 | Membrane-bound metallopeptidase. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.532 |
| CUH84467.1 | rppH | TM5383_01677 | TM5383_01675 | Membrane-bound metallopeptidase. | RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.726 |
| dapF | rppH | TM5383_02352 | TM5383_01675 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.922 |
| dbpA | nnr | TM5383_02950 | TM5383_02064 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | 0.953 |
| dbpA | rnr | TM5383_02950 | TM5383_01656 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.452 |
| dbpA | rppH | TM5383_02950 | TM5383_01675 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.749 |
| luxQ_2 | CUH84466.1 | TM5383_00790 | TM5383_01676 | Autoinducer 2 sensor kinase/phosphatase LuxQ. | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | 0.452 |
| luxQ_2 | CUH84467.1 | TM5383_00790 | TM5383_01677 | Autoinducer 2 sensor kinase/phosphatase LuxQ. | Membrane-bound metallopeptidase. | 0.532 |
| luxQ_2 | rppH | TM5383_00790 | TM5383_01675 | Autoinducer 2 sensor kinase/phosphatase LuxQ. | RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.818 |
| nnr | dbpA | TM5383_02064 | TM5383_02950 | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.953 |
| nnr | rhlE_1 | TM5383_02064 | TM5383_02826 | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | 0.953 |
| nnr | rhlE_2 | TM5383_02064 | TM5383_03062 | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | ATP-dependent RNA helicase RhlE. | 0.953 |
| nnr | rppH | TM5383_02064 | TM5383_01675 | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.957 |
| rhlE_1 | nnr | TM5383_02826 | TM5383_02064 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | 0.953 |
| rhlE_1 | rhlE_2 | TM5383_02826 | TM5383_03062 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase RhlE. | 0.644 |
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