STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH84645.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
CUH84644.1
Hydroxyacylglutathione hydrolase.
       0.787
CUH84643.1
Acyl-CoA dehydrogenase, short-chain specific.
       0.675
ctaH
Cytochrome c oxidase subunit 4.
       0.620
rimN
t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.578
CUH84647.1
Hypothetical protein.
       0.570
CUH85700.1
Hypothetical protein.
  
     0.547
CUH84028.1
Hypothetical protein.
  
     0.529
CUH85441.1
Hypothetical protein.
  
     0.522
CUH82948.1
Hypothetical protein.
  
     0.476
CUH83735.1
Hypothetical protein.
  
     0.437
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.