STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH84901.1Putative ABC transporter ATP-binding protein. (308 aa)    
Predicted Functional Partners:
CUH84900.1
Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
mntB_1
Manganese transport system membrane protein MntB.
 0.996
mntB_2
Manganese transport system membrane protein MntB.
 0.996
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 
 0.927
znuA
High-affinity zinc uptake system protein ZnuA precursor.
  
 
 0.848
zur
Zinc uptake regulation protein; Belongs to the Fur family.
 
  
 0.555
metH_2
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.448
luxQ_7
Autoinducer 2 sensor kinase/phosphatase LuxQ.
       0.447
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.406
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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