STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH85094.1Thiol:disulfide interchange protein precursor. (237 aa)    
Predicted Functional Partners:
CUH85095.1
Thioredoxin.
 
  
 0.947
eamA
Putative amino-acid metabolite efflux pump.
  
    0.649
zupT
Zinc transporter ZupT.
   
    0.487
ccmC
Cytochrome c-type biogenesis protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.477
cycY
Cytochrome c biogenesis protein CycY.
  
  
 0.468
CUH82851.1
Hypothetical protein.
  
     0.464
tlpA
Cytochrome c biogenesis protein TlpA.
 
  
 0.454
CUH85092.1
Putative enzyme related to lactoylglutathione lyase.
       0.433
ccmE
Heme chaperone CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
     
 0.405
ccmF
Cytochrome c-type biogenesis protein CcmF.
     
 0.405
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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