Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | cysW_2 | TM5383_02324 | TM5383_02327 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Sulfate transport system permease protein CysW. | 0.461 |
| aroC | thiB | TM5383_02324 | TM5383_02326 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Thiamine-binding periplasmic protein precursor. | 0.465 |
| aroC | thiQ | TM5383_02324 | TM5383_02328 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.439 |
| cysW_2 | aroC | TM5383_02327 | TM5383_02324 | Sulfate transport system permease protein CysW. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.461 |
| cysW_2 | thiB | TM5383_02327 | TM5383_02326 | Sulfate transport system permease protein CysW. | Thiamine-binding periplasmic protein precursor. | 0.996 |
| cysW_2 | thiQ | TM5383_02327 | TM5383_02328 | Sulfate transport system permease protein CysW. | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.997 |
| modB_1 | thiB | TM5383_00938 | TM5383_02326 | Molybdenum transport system permease protein ModB. | Thiamine-binding periplasmic protein precursor. | 0.561 |
| modB_1 | thiQ | TM5383_00938 | TM5383_02328 | Molybdenum transport system permease protein ModB. | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.642 |
| tauB | thiB | TM5383_00083 | TM5383_02326 | Taurine import ATP-binding protein TauB. | Thiamine-binding periplasmic protein precursor. | 0.445 |
| thiB | aroC | TM5383_02326 | TM5383_02324 | Thiamine-binding periplasmic protein precursor. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.465 |
| thiB | cysW_2 | TM5383_02326 | TM5383_02327 | Thiamine-binding periplasmic protein precursor. | Sulfate transport system permease protein CysW. | 0.996 |
| thiB | modB_1 | TM5383_02326 | TM5383_00938 | Thiamine-binding periplasmic protein precursor. | Molybdenum transport system permease protein ModB. | 0.561 |
| thiB | tauB | TM5383_02326 | TM5383_00083 | Thiamine-binding periplasmic protein precursor. | Taurine import ATP-binding protein TauB. | 0.445 |
| thiB | thiQ | TM5383_02326 | TM5383_02328 | Thiamine-binding periplasmic protein precursor. | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.994 |
| thiQ | aroC | TM5383_02328 | TM5383_02324 | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.439 |
| thiQ | cysW_2 | TM5383_02328 | TM5383_02327 | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | Sulfate transport system permease protein CysW. | 0.997 |
| thiQ | modB_1 | TM5383_02328 | TM5383_00938 | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | Molybdenum transport system permease protein ModB. | 0.642 |
| thiQ | thiB | TM5383_02328 | TM5383_02326 | Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | Thiamine-binding periplasmic protein precursor. | 0.994 |