STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtAmmonia transporter. (445 aa)    
Predicted Functional Partners:
glnB_2
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 0.999
glnB_1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 0.998
gltB
Glutamate synthase [NADPH] large chain precursor.
 
  
 0.910
gmr
Cyclic di-GMP phosphodiesterase Gmr.
     0.903
dosP
Oxygen sensor protein DosP.
      0.891
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.886
glnL
Nitrogen regulation protein NR(II).
 
 
 0.727
rcsC_2
Sensor kinase protein RcsC.
 
  
 0.615
rcsC_1
Sensor kinase protein RcsC.
 
  
 0.603
luxQ_5
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
  
 0.596
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.